Pathway Analysis
Baseline & Posterior log2FC
Immune Pathway Analysis for Serially Sacrified Rhesus infected with Marburg Virus
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4-1BB signaling in T lymphocytes
Acute phase response signaling
B cell activating factor signaling
Calcium-induced T lymphocyte apoptosis
CD28 signaling in T helper cells
Colorectal cancer metastasis signaling
Complement system
Death recetpor signaling
Dendritic cell maturation
EIF2 signaling
HMGB1 signaling
iCOS-iCOSL signaling in T helper cells
Interferon signaling
LPS IL-1 mediated inhibition of RXR function
LXR RXR activation
Mitotic roles of polo-like kinase signaling
p38 MAPK signaling
p53 signaling
p70S6K signaling
PEDF signaling
PKC0 signaling in T lymphocytes
Production of NO and ROS in macrophages
Role of IL-17F in allergic inflammatory airway diseases
Role of NFAT in regulation of the immune response
Role of PRRs in Recognition of Bacteria and Viruses
Sphingosine-1-phosphate signaling
TGF-B signaling
TLR signaling
TREM1 signaling
Type II diabetes melltius signaling
UVA-induced MAPK signaling
VDR RXR activation
CellDeath pathway finder
Cytokines and chemokines
Inflammasome
Innate and adaptive immune responses Rh macaque
NO signaling
T and B cell activation
T cell anergy and immune tolerance
T helper cell differentation
Heatmap
Principal Compoment Analysis
Table of Genes in the Pathway
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Gene Label Size
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Show Pathway Disturbance* bar
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Cluster or not
hierarchical clustering
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Fold Change Scale
scale free (FC limits are different for each tissue)
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Choose Color Palette for heatmaps
viridis color scheme
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Inguinal
Mesenteric
Tracheobronchial
PC1 vs PC2 (computed with TPM)
PCA Loadings
Select Genes
gene(s)
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